g at the start

and during (final) sprints In these occa

g. at the start

and during (final) sprints. In these occasions, i.e. when exercising above CP, W’ will be reduced. Consequently, a higher W’ can increase performance during tests of longer duration, especially if pacing strategies are implemented. We also found that five bolus intakes on five consecutive days did not result in an increase of T lim beyond the value observed after the first intake. Thus, multiday administration of NaHCO3 did not lead to a find more cumulative effect on endurance capacity. Accordingly, [HCO3 -], blood pH, and ABE after multiday NaHCO3 administration also remained unchanged relative to the initial rise after the first bolus. The most obvious explanation would be that during each CP-trial P5091 mouse a certain amount of NaHCO3 was used, leading to lower values for [HCO3 -], pH and ABE post vs. pre test. During the following 24 h of recovery, the body would then be expected to re-establish the resting values.

On the following day, the participants then would start the CP trial at similar (complete recovery) or lower [HCO3 -], blood pH, and ABE (incomplete recovery) relative to the first day, whereby an additional increase in performance would not be expected. Although we did not measure [HCO3 -], pH and ABE before supplementation on the following days, these two described cases can be most likely excluded. The reason for this is that [Na+] also did not increase during the consecutive 5 days Cytoskeletal Signaling inhibitor of NaHCO3 supplementation despite the fact that Na+, unlike HCO3 -, was not used as a buffer during the CP trials, and that the high amount of ingested Na+ could not be used completely through sweating. Tobramycin The predicted sweating rate during exercise of 1 dm3∙ h-1 water, with a sweat [Na+] of 50 mEq∙ dm3[34] would have led to a Na+ loss of ~0.36 g. This calculated sweat-induced loss of Na+ corresponds to ~20% of the daily Na+ intake during the placebo intervention. Regarding the substantially higher Na+ intake during the NaHCO3 intervention, the sweat-induced loss of Na+ was negligible during

this intervention. As shown in this study, the NaHCO3 intervention led to an increase in [Na+] and plasma osmolality after the first bolus administration. This increase was counteracted by an expansion in PV. The increase in PV was to such an extent that pre-exercise blood [HCO3 -], pH, and ABE remained constant during the 5 days of testing. This proposed mechanism of PV expansion has already been described by Máttar et al.[35], who showed that plasma [Na+] and plasma osmolality were increased after NaHCO3 injections in acute cardiac resuscitation. Other mechanisms to counteract increases in [Na+] and plasma osmolality comprise a shift of fluid from the intra- to the extramyocellular compartment [36], a stimulation of arginine vasopressin secretion [37], which leads to an intensified water retention from the kidneys [38], and a stimulation of the thirst center whereby more fluid is consumed [37]. In accordance with our results, McNaughton et al.

That is why it is valuable to study the resistive switching behav

That is why it is valuable to study the resistive switching behavior free from the forming process. In this regard, the thickness of the

CeO x layer was reduced from 25 to 14 nm in the Zr/CeO x /Pt devices. It is noticed that by reducing the thickness of the CeO x layer, the forming voltage is also reduced. At 14-nm-thick CeO x , the Zr/CeO x /Pt this website device shows a forming-free behavior, as indicated in Figure 4b. Figure 4b shows the first switching cycle of this device. Initially, the device is in LRS [21], so the first reset process (V off = -1.4 V) is required to initialize the device by rupturing the preformed conductive filaments between two electrodes, and the device is switched to HRS [22]. A unique resistive switching behavior can be obtained without any forming process, which is more advantageous buy MI-503 for the application point of view [2, 22]. Conversely, a positive voltage (V on) of about +1 V is required for the rapid transition of current from HRS to LRS, called the ‘set process.’ During the set process, oxygen vacancies migrate from the top reservoir (ZrO y layer) and form conducting filaments [2, 4, 13, 20]. A compliance current of 1 mA was applied to prevent the device Cyclosporin A datasheet from permanent breakdown. An appropriate negative voltage (-0.7 V) is applied to switch the device from LRS back to HRS. During the reset process, the conductive filament is ruptured

by the reoxidation of oxygen ions [2, 13, 22, 25]. Figure 4 Typical bipolar ( I – V ) curves of resistive switching behavior in Zr/CeO x /Pt devices with different CeO x layer thicknesses. (a) 25 nm and (b) 14 nm. To evaluate the memory switching performance of the Zr/CeO x /Pt device, endurance characteristics are performed. The memory cell is switched successfully in consecutive 104 switching cycles (I-V curves) with approximately 40 resistance ratios between HRS and LRS, as shown in Figure 5. Both HRS and LRS are quite stable and no ‘set fail’ phenomena are observed. Figure 6a shows the statistical distribution of

LRS and HRS of the device. Furthermore, the device has very good uniformity of resistance values in both HRS and LRS. Figure 6b depicts the distribution of set (V Farnesyltransferase set) and reset (V reset) voltages for the device, which shows a narrow range of V reset (from -0.5 to -1 V) and V set (from 0.5 to 1.3 V) values. The data retention characteristics of the Zr/CeO x /Pt device are measured at room temperature (RT) and at 85°C, respectively. As shown in Figure 7a, the HRS and LRS are retained stable for more than 104 s at RT and 85°C with a resistance ratio of approximately 102 times at 0.3 V. Hence, suitable read/write durability is obtained. The nondestructive readout property is also verified. As shown in Figure 7b, the two resistance states are stable over 104 s under 0.3 V at RT and 85°C, without any observable degradation.

The bacterial cultures in TSB+HTMS

The bacterial cultures in TSB+HTMS MEK162 chemical structure medium with addition of 30 % glycerol were stored at −70 °C. Before each experiment, bacterial strains were subcultured on HAEM medium and incubated overnight at 35 °C in about 5 % CO2 atmosphere. Growth assay Preliminary in vitro antibacterial activity of compounds N-ethyl-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide, N-(4-metoxyphenyl)-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide, and N-cyclohexyl-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide was screened by the broth microdilution method using 96-well polystyrene microplates (NUNC, TC MICROWELL 96F Nunclon D) on the basis of MIC (minimal inhibitory

concentration), usually defined as the lowest concentration of the compounds at which there was no visible growth of microorganisms. The antibacterial activity was tested according to EUCAST (2003) selleckchem procedure with some modifications. In order to assay the influence of the tested

pyrazole derivatives on the growth of haemophili rods, 198 μl of TSB+HTMS medium without (control) and with a series of twofold dilution of the tested compounds in the range of final concentration from 1,000 to 62.5 μg ml−1 was inoculated with 2 μl of the standardized microbial suspension (total volume per each well ––200 μl), and then incubated for 18 h at 35 °C in the presence of about 5 % CO2. Then in order to assay the influence of the tested N-ethyl-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide with highest inhibitory effect against the planktonic cells of Haemophilus spp., 198 μl of TSB+HTMS medium without (control) and with a series of twofold dilution of the tested compound in the range of final concentration from 0.12 to 31.25 μg ml−1 was inoculated with 2 μl of the standardized microbial suspension (total volume per each well––200 μl), and then incubated for 18 h at 35 °C in the presence of about 5 % CO2. ID-8 After incubation,

spectrophotometric measurements of optical density at wavelength λ = 570 (OD570) of the bacterial cultures with or without the tested compound were done by using a microplate reader (ELx800 BioTek) in order to determine MIC. The MIC values were determined by comparison to the growth of a OICR-9429 manufacturer control (compound-free) medium. Ampicillin was used as a reference antimicrobial agent on selected H. parainfluenzae (penicillinase-positive or penicillinase-negative strains) isolates at the same conditions. The blank control wells without or with twofold dilution of the tested compounds added to TSB+HTMS broth without bacterial suspension were incubated under the same conditions. The experiments were performed in triplicate. Biofilm assay In order to assay the effect of N-ethyl-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide on Haemophilus spp. biofilm formation, the method based on staining with 0.1 % crystal violet described previously by Kaplan and Mulks (2005) with some modifications (Kosikowska and Malm, 2009) was used.

9%) compared with Tau-positive group (54 3%), with

statis

9%) compared with Tau-positive group (54.3%), with

statistical significance (p=0.0299). The results are demonstrated in Table 6. Table 6 Association between Tau expression and response to chemotherapy in Belnacasan datasheet patients with measurable target lesions according to RECIST scale (n=46) Response to chemotherapy according to RECIST Negative Tau expression (n=11) Positive Tau expression Selleck Ipatasertib (n=35) Mann – Whitney test U n % n % Z P OR (CR+PR) 10 90.9% 19 54.3% 2.17 0.0299 SD+PD 1 9.1% 16 45.7% CR 10 90.9% 18 51.4% 2.09 0.0362 PR – - 1 2.9% SD – - 9 25.7% PD 1 9.1% 7 20% Abbreviations: OR – objective response, CR – complete response, PR- partial

response, SD – stable disease, PD – progression disease. Discussion Currently, the most effective chemotherapy in ovarian cancer, recognized as a gold standard is platinum analogue combined with paclitaxel. About 70% of the patients respond to this regimen. The others potentially could benefit from different drugs. However, no predictive factors are known in ovarian cancer. As far as we are concerned, in our study Tau protein was assessed in the tissues of ovarian cancer for the first time by the use of immunohistochemistry (IHC). Majority of the patients was acknowledged as Tau-positive (74.3%), while BB-94 order 25.6% of

the patients was Tau-negative. The results differ from those achieved in other studies. Rouzier et al. recognized 52% of the breast cancer patients as Tau-negative [4]. Similar proportion (57% of Tau-negative) was demonstrated by Pusztai et al. [8] 30% of the patients with gastric cancer in Mimori et al. study was identified as Tau-negative [9]. Obtained findings indicate that Tau protein expression might differ among cancer sites. In our study, Tau-negative status in primary tumor of ovarian cancer was identified as a predictive factor for paclitaxel-containing chemotherapy. Both groups seem to be well balanced regarding to age, FIGO stage, histological type, performance status and grade (Table 7) so it does not seem that there were any biases Cyclic nucleotide phosphodiesterase in this field although it necessary to remember that our study was conducted retrospectivly, so its value is limited. In univariate analysis median PFS was 12.8 months longer in Tau-negative group (p=0.0355). Among 46 patients with measurable target lesions, those qualified as Tau-negative achieved statistically significant more objective responses according to RECIST criteria in comparison to patients with Tau-positive ovarian cancers (90.9% and 54.3% respectively; p=0.0299).

CrossRef 12 Sun Y, Li Xq, Cao J, Zhang Wx, Wang HP: Characteriza

CrossRef 12. Sun Y, Li Xq, Cao J, Zhang Wx, Wang HP: Characterization of zero-valent iron nanoparticles. Adv Colloid Interface buy Emricasan Sci 2006,120(1–3):47–56.CrossRef 13. Horak D, Petrovsky E, Kapicka A, Frederichs T: Synthesis and characterization of magnetic poly(glycidyl methacrylate) microspheres. J Magn Magn Mater 2007,311(2):500–506.CrossRef 14. Masheva V, Grigorova M, Nihtianova D, Schmidt JE, Mikhov M: Magnetization processes of small gamma-Fe2O3 particles in non-magnetic matrix. J Phys D: Appl Phys 1999,32(14):1595–1599.CrossRef

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V, Muzikar C: Teorie Elektromagnetickeho Pole. Praha: Akademia www.selleckchem.com/products/BIRB-796-(Doramapimod).html Karolinum; 1958. 19. Rosicka D, Sembera J: Assessment of influence of magnetic forces on aggregation of zero-valent iron nanoparticles. Nanoscale Res Lett 2010, 6:10. 20. Sembera J, Rosicka D: Computational methods for assessment of magnetic forces between iron nanoparticles and their influence on aggregation. Adv Sci Eng Med 2011,3(1,2):149–154. 21. Rosicka D, Sembera J: Influence of structure of iron nanoparticles in aggregates on their magnetic properties. Nanoscale Res Lett Rebamipide 2011, 6:527.CrossRef 22. Stumm W, Morgan JJ: Aquatic Chemistry: Chemical

Equilibria and Rates in Natural Waters. New York: Wiley; 1996. 23. Dzombak DA, Morel FMM: Surface Complexation Modeling: Hydrous Ferric Oxide. 1st edition. New York: Wiley-Interscience; 1990. 24. Lyklema J: Fundamentals of Interface and Colloid Science. Amsterdam: Academic Press; 2005. 25. Sedlak B, Stoll I, Man O: Elektrina a magnetismus. Praha: Academia Karolinum; 1993. Competing interests The authors declare that they have no competing interests. Authors’ contributions DR carried out the study of the assessment of the aggregate structure according to interaction energies of the aggregate and with the inclusion of magnetic and electrostatic forces into the aggregation model. JŠ contributed to the conception of the study and to the interpretation of data, and revised the manuscript. Both authors read and approved the final manuscript.”
“Background Graphene (GR) has become one of the most well-known carbon nanomaterials due to its unique optical, electrical, and thermal properties which arise from its unique 2D hexagonal honeycomb crystal structure.

Int J Syst Bacteriol 1997, 47:385–393 PubMedCrossRef 5 Suh SO, B

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, and Candida carpophila comb. nov. FEMS Yeast Res 2005, 5:463–469.PubMedCrossRef 7. Kam AP, Xu J: Diversity of commensal yeasts within and among healthy hosts. Diagn Microbiol Infect Dis 2002, 43:19–28.PubMedCrossRef 8. Xu J, Mitchell TG: Geographical differences in human oral yeast flora. Clin Infect Dis 2003, 36:221–224.PubMedCrossRef 9. Krcmery V, Barnes AJ: Non-albicans Candida spp. causing fungaemia: pathogenicity and antifungal

resistance. J Hosp Infect 2002, 50:243–260.PubMedCrossRef 10. Savini V, Catavitello C, Onofrillo D, Masciarelli G, Astolfi D, Balbinot A, Febbo F, D’Amario C, D’Antonio D: What do we know about Candida guilliermondii ? A voyage throughout past and current literature about this emerging yeast. Mycoses 2011, 54:434–441.PubMedCrossRef 11. Papon N, Savini V, Lanoue A, Simkin AJ, Creche J, Giglioli-Guivarc’h N, Clastre M, Courdavault V, Sibirny AA: Candida guilliermondii STAT inhibitor : biotechnological applications, perspectives for biological control, emerging clinical importance and recent advances in genetics. Curr Genet 2013. (in press) (doi:10.1007/s00294–013–0391–0) 12. Miceli MH, Diaz JA, Lee SA: Emerging opportunistic yeast infections. Lancet Infect Dis 2011, 11:142–151.PubMedCrossRef

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The cell viability was measured by LDH assay after 6 h of growth

The data represents mean of three biological replicates and SD. Asterisk denotes significant (p<0.05) difference from solvent control (DMSO). (B) Survival of Caco-2 cells in presence of 100 μg/ml limonoids. The cell viability was measured by LDH assay after 6 h of growth in presence

of limonoids. Citrus limonoids repress the LEE, flagellar and stx2 genes Adherence of EHEC to epithelial cells is facilitated by several factors including locus of enterocyte effacement (LEE) EGFR inhibitor encoded TTSS, flagella, effector proteins and intimin [46–48]. To determine the probable mode of action, effect of limonoids on expression of six LEE encoded genes ler, escU, escR (LEE1 encoded), escJ, sepZ and cesD (LEE2 encoded), flagellar

master regulators flhDC and stx2 was studied. Isolimonic GSK2126458 chemical structure acid and ichangin exerted the strongest effect on the LEE in EHEC grown to OD600 ≈ 1.0 in LB media. The transcriptional regulator of LEE, the ler, was repressed 5 fold by isolimonic acid, while other LEE encoded genes were down-regulated by 6–10 fold (Table 4). Ichangin treatment resulted in ≈ 2.5-6 fold repression of LEE encoded genes. IOAG repressed the escU, escR, escJ and cesD by 3.2, 2.5, 3.7 and 2.6 fold, respectively while aglycone, isoobacunoic acid did not seem to affect the expression of LEE encoded genes under investigation (Table 4). Similarly, DNAG treatment did not resulted in differential expression of any genes. Furthermore, isolimonic acid repressed the flhC and flhD by 4.5 and 6.9 fold, respectively (Table 4), while

ichangin exposure resulted in 2.8 fold repression of flhC and flhD. IOAG selleck chemicals repressed flhC and flhD by 2.1 from and 2.3 folds, respectively. Isoobacunoic acid and DNAG treatment did not seem to modulate the expression of flhDC (Table 4). Table 4 Expression of LEE encoded, flagellar and stx2 genes in presence of 100 μg/ml limonoids Gene name Ichangin Isolimonic acid Isoobacunoic acid IOAG DNAG ler -3.2 (±2.1) -5.0 (±0.8) -1.4 (±0.3) -1.8 (±0.4) -0.7 (±1.5) escU -5.3 (±0.8) -6.6 (±1.0) -1.6 (±0.1) -3.2 (±0.3) -2.0 (±0.6) escR -2.5 (±0.7) -6.3 (±1.3) -1.7 (±0.3) -2.5 (±1.2) -2.3 (±0.5) escJ -6.2 (±1.0) -12.4 (±2.1) -2.4 (±1.3) -3.7 (±2.0) -1.2 (±2.4) sepZ -2.7 (±0.1) -6.9 (±1.1) -0.7 (±1.5) -1.7 (±0.6) -1.6 (±0.8) cesD -3.5 (±0.7) -10.0 (±1.5) -3.0 (±1.2) -2.6 (±1.7) -1.6 (±0.8) flhC -2.8 (±0.9) -4.5 (±1.3) -1.5 (±0.3) -2.1 (±0.4) -1.3 (±0.3) flhD -2.8 (±0.5) -6.9 (±0.4) -1.8 (±0.5) -2.3 (±0.4) -1.7 (±0.5) stx2 -2.5 (±0.8) -4.9 (±1.0) -1.6 (±0.4) -2.2 (±0.8) -1.2 (±0.1) rpoA -0.3 (±1.8) -0.5 (±1.6) 1.8 (±0.8) 1.3 (±0.4) 1.7 (±0.5) The EHEC ATCC 43895 was grown to OD600≈1.0, RNA was extracted using RNeasy kit and converted to cDNA as described in text.

In addition to the 207 sequences collected in Norway that were

In addition to the 207 sequences collected in Norway that were

included in this study, three additional isolates were sequenced and excluded because they coded for truncated proteins. CagA EPIYA genotyping To discriminate the East Asian from the European isolates, the CagA genotype was determined in the 20 Korean samples and 50 of the Norwegian ones. Amplification and sequencing of the 3’ region of the cagA gene was performed as described Entospletinib cost by Yamaoka et al.[48]. Amplification of vacA To confirm the African origin of one of the Norwegian samples, PCR amplification of the vacA signal sequence and mid-region was performed as described by Atherton et al. [49]. Biogeographic see more analysis Reference phylogenetic tree A reference phylogenetic tree was constructed using concatenated HK genes (atpA, efp,

ppa, tphC, ureI, trpC, and mutY) collected from the H. pylori Multi Locus Sequence Adriamycin Typing (MLST) database http://​pubmlst.​org/​helicobacter/​ as described by Falush et al.[11]. In addition, 19 of the 29 currently-sequenced H. pylori genomes (See Appendix 1 for further annotation) collected from the National Center for Biotechnology Information (NCBI) database http://​www.​ncbi.​nlm.​nih.​gov and four Norwegian isolates, sequenced according to the H. pylori MLST protocol, were used in the reference tree construction. In total, 393 sequences were aligned using ClustalW [50], and regions with gaps were removed using BioEdit [51]. Model selection in MEGA5 [52] was used why to determine the best fit model for maximum likelihood (ML) analysis. PhyML v3.0 [53] was used to generate 1000 ML bootstrap trees using the generalized time-reversible (GTR) model in which both the discrete gamma distribution (+G) with five rate categories and invariable sites (+I) were set to 0.61, as this was the model with the lowest Bayesian Information

Criterion score. A consensus tree was constructed with Phylip’s Consense package [54] and imported into FigTree v1.3.1 http://​tree.​bio.​ed.​ac.​uk/​software/​figtree/​ for further visualization. These resolved trees contain monophyletic groups not contradicting more frequent groups with a 50% default threshold (majority-rule). As a supplement, a strict analysis with a higher threshold was included where only groups occurring more than 75% are included. PldA phylogenetic tree The phylogenetic tree for pldA gene sequences was constructed using the same method as described for the reference tree. The pldA sequences were obtained through a Blast search of jhp_0451, limiting the search to H. pylori genome sequences. Only pldAON sequences coding for the entire OMPLA protein were included in this study. In addition, 19 of the 29 currently-sequenced H. pylori genomes collected from the NCBI database were aligned with the pldA gene sequences from the 227 isolates described in the current study. Genomes containing pldA genes that coded for truncated proteins were excluded from analyses.

Jaspers E, Overmann J: Ecological significance of microdiversity:

Jaspers E, Overmann J: Ecological significance of microdiversity: identical 16S rRNA gene sequences can be found in bacteria with highly divergent genomes and ecophysiologies. Appl Environ Microbiol 2004,70(8):4831–4839.PubMedCentralPubMedCrossRef 29. Dopfer D, Anklam K, Mikheil D, Ladell P: Growth curves and morphology of three Treponema subtypes isolated from digital dermatitis in cattle. Vet J 2012,193(3):685–689.PubMedCrossRef 30. Stokes JE, Leach KA, Main DC, Whay HR: An investigation into the use of infrared thermography (IRT) as a rapid diagnostic tool for foot lesions in dairy cattle. Vet J 2012,193(3):674–678.PubMedCrossRef 31. Kuramitsu HK, He X, Lux R, Anderson MH, Shi W: Interspecies

interactions within oral microbial communities. Microbiol Mol Biol Rev 2007,71(4):653–670.PubMedCentralPubMedCrossRef 32. Elliott MK, Alt DP, Zuerner RL: Lesion formation and antibody response induced by papillomatous digital dermatitis-associated spirochetes in a murine abscess selleck chemical model. Infect Immun 2007,75(9):4400–4408.PubMedCentralPubMedCrossRef 33. Salanitro JP, Muirhead PA: Quantitative method for the gas chromatographic analysis of short-chain monocarboxylic

and dicarboxylic acids in fermentation media. Appl Microbiol 1975,29(3):374–381.PubMedCentralPubMed 34. Stanton TB, Lebo DF: Treponema hyodysenteriae growth under various culture conditions. Vet Microbiol 1988,18(2):177–190.PubMedCrossRef 35. Trott DJ, Stanton TB, Jensen NS, click here Hampson DJ: Phenotypic characteristics of Serpulina pilosicoli the agent of intestinal Selleck CX-6258 spirochaetosis. FEMS Microbiol Lett 1996,142(2–3):209–214.PubMedCrossRef 36. Clarke PH: Hydrogen sulphide production by bacteria. J Gen Microbiol 1953,8(3):397–407.PubMedCrossRef 37. Chevreux B, Wetter T, Suhai S: Genome Sequence Assembly Using Trace Signals and Additional Sequence Information. Computer Science and Biology: Proceedings of the German Conference on Bioinformatics (GCB) 99 1999, 45–56. 38. Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, et al.: The RAST Server: rapid annotations using subsystems technology. BMC Genomics 2008, 9:75.PubMedCentralPubMedCrossRef 39. Auch AF, von Jan M,

Klenk Decitabine in vivo HP, Goker M: Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison. Standards in Genomic Sci 2010,2(1):117–134.CrossRef 40. Kent WJ: BLAT–the BLAST-like alignment tool. Genome Res 2002,12(4):656–664.PubMed 41. Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P, Tiedje JM: DNA–DNA hybridization values and their relationship to whole-genome sequence similarities. Int J Syst Evol Microbiol 2007,57(1):81–91.PubMedCrossRef Competing interest The authors declare they have no competing interests. Authors’ contributions MKH, RLZ conceived the study, designed and inititated biochemical and biological experimental work. JHWW completed experimental biochemical and biological work, prepared manuscript for publication.

TTGE/DGGE has been applied to study dominant bacteria of dairy pr

TTGE/DGGE has been applied to study dominant bacteria of dairy products, enabling detection of species accounting for at least 1 to 10% of the total flora, depending on the amplification efficiency of the PCR step for a given

species [4, 12]. Surface contamination of smear cheese by Listeria monocytogenes is of concern for the industry since listeriosis breakouts have been associated with consumption of cheese [13]. Improvements in hygienic conditions and application of safety guidelines failed to reduce the contamination frequency to an acceptable level [14]. Growth of Listeria on cheese surface is closely linked to the development of the BMS202 surface ecosystems and is primarily supported by yeast growth, which leads to deacidification and provides nutrients for bacterial growth. Listeria sp. has been shown to grow easily on smear cheeses when defined ripening cultures containing Debaryomyces hansenii, Geotrichum candidum and Brevibacterium linens were used [15, 16]. Certain complex Rabusertib consortia naturally developing on smear cheese surface have been shown to inhibit Listeria sp. in situ [9, 15, 17]. In vitro studies of these anti-listerial activities led to the isolation of bacteriocin-producing strains among ripening microorganisms in certain cases [18, 19].

Application of the bacteriocin producing strain on artificially contaminated cheeses failed however to fully restore the inhibition [15] or disturbed the development of the smear [20]. A better knowledge of microbial biodiversity and in situ BAY 11-7082 population dynamics is crucial to identifying species that may be involved in the inhibition. Saubusse et al. [21] successfully used this approach

for detecting antilisterial flora naturally developing in the core of Saint-Nectaire type cheese. The objective of the present study was therefore to investigate population dynamics of complex cheese surface consortia with respect to their in situ inhibition properties. Two surface consortia were isolated from commercial Raclette type cheeses. TTGE was used for assessing biodiversity of both consortia at species level. An in-house database for species-level identification PTK6 of the bands appearing in the TTGE fingerprints was developed with cultivable isolates. The two complex consortia or a control flora (defined commercial culture) were then applied on freshly-produced Raclette cheeses that were artificially contaminated with Listeria innocua. Population dynamics and Listeria growth were monitored over 60 to 80 ripening days. Results Bacterial biodiversity of cheese surface consortia by cultivation – Development of a TTGE profiles database Consortium F was serial plated on five selective and non-selective media. A total of 128 cultivable isolates were subjected to TTGE fingerprinting analysis and grouped into 16 TTGE profiles. One representative isolate of each profile was randomly selected and subjected to 16S rDNA sequencing.