In bold are the locations shared by the four O157:H7 strains. The direct repeats (duplication are in red). IS629 sites were numbered from 1 – 47 starting with all sites in Sakai, followed by all additional, unshared sites from EDL933, EC4115, the sites found in the plasmids and unshared sites of strain TW1435. The newly found IS629 insertion in O rough:H7 strain MA6 was numbered IS.39. (DOC 200 KB) Additional file 4: “”Table S3″”. IS629 target site presence/absence in CC strains from the O157:H7 stepwise evolutionary model. (XLS 56 KB) Additional file 5: “”Table Doramapimod clinical trial S4″”. Primer sequences for the amplification
of each flanking IS629 regions on the four E. coli genomes available (see Additional Table 2). If IS absent size equal to 0 bp means that the primer pair was designed with one target region inside IS629 therefore the IS629 target site could not be observed. (DOCX 22 KB) References 1. Feng P:
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